rs33877610 SNP Detail

Summary

• ID
  rs33877610
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:104805965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG ATGGCATCAG ACCCCCTGGT
  K
  CAGGAATTGC AAGCACATGT GAGCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss46512171	mCV24028763	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss134261150	ENSMUSSNP5195391	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs33877610					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:104805965 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22903	CpG island 22903	1531 bp proximal
Cpgi22904	CpG island 22904	1873 bp proximal
Fgf16	fibroblast growth factor 16	1920 bp upstream
Rr2509	regulatory region 2509	436 bp proximal
Rr8194	regulatory region 8194	436 bp proximal
Tssr161753	transcription start site region 161753	1903 bp upstream