rs33879579 SNP Detail

Summary

• ID
  rs33879579
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:149278578 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AAAAT GGAGGAGAGG AGGAGCAGGA
  Y
  TTTTATCTTC TTTTGGGCTC AGCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss46522243	mCV23785684	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss134501747	ENSMUSSNP5233004	ENSEMBL	ENSEMBL_Sanger	r	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33879579					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:149278578 () rs orientation: reverse

Symbol	Name	Function Class
Gm61895	predicted gene, 61895	1934 bp upstream
Tssr162303	transcription start site region 162303	1922 bp upstream