rs33881358 SNP Detail

Summary

• ID
  rs33881358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67187322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTAAAGATTT CTTATTATCC TCAAAATGAA TTTTAGAATA TGTAAGAACA AGAAACTCTG
  AGAAATTATG CTGCTACCTA AAAATTTTAT AAGTAACTAA TTAAAAGACT CAAAAATTCA
  GCCACTAACT TGCTAGATGC CTCTGCCCTG GCGATTTCTC CAGCTTCTCA GTGTGTGTTT
  TGCCTTAAGT GTAGGGGGGA CTTTTGGTAT AGCATTGGAA ATGTAAATGA GCTAAATACC
  TAATAAAAAA TGGAAAAATA AAAAAAAAAA GAAATCTTTA AATAGAAATG GAAACTTCGA
  R
  CAATTATAGT GTTAGGAACT ATCATAAACA TTTGAATGAA TTAAAAATGA TGTGTGGAAA
  TGTATTTCAT TTACTTTTTA CTTTTCTTTT TTTTTAATCC TATTTGACAA CCAGTATTGA
  TAAAATGATT GAAATCAAAA CTAAACCATA TCATTAAATC AACGTCCTTG ACTTAAACAA
  CTAGTTCTAT AGTGCTCAGA AATTATTACA ACTTCCTTAT TTACATATGA AAAACTGAGA
  ATGGAGGTGG GGGGGGGGCA ACTTGCCCTA AACAAAAAAA ACCTATGGGT TGTTGGAGAC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss38672708	mCV23988906	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss323719447	CHEV_11_67109998	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33881358					SNP	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss132327345	ENSMUSSNP1910558	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67187322 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3068	CpG island 3068	1975 bp proximal
Myh8	myosin, heavy polypeptide 8, skeletal muscle, perinatal	within coordinates
Tssr3531	transcription start site region 3531	1978 bp downstream
Tssr102226	transcription start site region 102226	1932 bp downstream
Tssr102227	transcription start site region 102227	1969 bp upstream
Tssr108547	transcription start site region 108547	1247 bp downstream
Tssr108548	transcription start site region 108548	2000 bp downstream