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rs33882245 SNP Detail
Summary
  • ID
    rs33882245
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr12:16858635 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AGCTCCTTGG GGTAAATTTT
    GTAATCTTAC TGATCTTCGA TTTTCTGATC TGTAAACTGG GAAGAAAACT ATTCTTCAGG
    ACTTGCTGGC AGCAGAAACT TGTATTTTGT TGTTGCTTTG GTTGTTTAAG ACATGGTCTC
    TCGCTATGTA ACCCTGGCTG ATCTCTAGCA TCTGGTGGTC CTACTTCAGT GTCCAGAGTG
    Y
    TGTTATTCTG AGCATACACT ACCATGCTTG GTCATACCTT CAGATCTGAA ATGAGAGTCA
    CATGAACAAA GGTATAGAGA GGGTTTGGCA TTCAACAGAG GATGGAGAAA GGGGTCTTAA
    AATTAGCCAT GCCTGTTTTC CAGCATTGGA TCTCTCCGAA CTCCTTGTGG TAGAGTCTTT
    CCTAGTTGCT CTGAGAAACT                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss38951598 mCV22349774 ABI CRAMUS_MOUSE f SNP T C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs33882245 SNP T C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:16858635 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi4441 CpG island 4441 1960 bp proximal
Rr463369 regulatory region 463369 217 bp distal
Rr463370 regulatory region 463370 1857 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory