rs33883363 SNP Detail

Summary

• ID
  rs33883363
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:62533380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATATATCC CCAATCGTGG
  TCCTCTGGAC AAGTGGAGAG CCCTGCATTC CTGAAGGCTT CAATAGTTCT CTCCTATACC
  CTACCAAATC GTTCAATAAT AAATCTCTCA TCAAGTCGGA AAAAAAAAAA GAAATTCTTA
  TGCCTGGGAA ACATCACAGA ATGGATACAA GTAAGAAGCA GTGCTGCATT TAAAGCGAAC
  M
  AATAATTGAC TTTTTACAAA CAGAAATATT ATTGAAAAAA CACATAGCCA TTCTGACTTT
  GTAAAAGAAT AGTCCATTTC CTGGTAGAAG GAATAGCATC TTTCAAATAC TGTTTGACCT
  TGCCTCTATG TGGATTGTTG CCTGCTGAGA ACTGTAACTT GACACACAAC TACAGACAAT
  GAAGTCCTGT GTTTTAAATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39078026	mCV22679089	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss149128088	ENSMUSSNP5091577	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33883363					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:62533380 () rs orientation: forward

Symbol	Name	Function Class
Gm23855	predicted gene, 23855	514 bp downstream
Gm48690	predicted gene, 48690	150 bp downstream
Rr273197	regulatory region 273197	1421 bp proximal
Rr281523	regulatory region 281523	1780 bp distal