rs33883595 SNP Detail

Summary

• ID
  rs33883595
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:120103555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGCGACTCA GGGATTTTTG ATATAATCAC ATTTGTGAAT CTTTCATTGC TCTAATTATA
  GCATTAGATA TAATTAACGG AAGGATATCC TGTTCCTGTT AGCAACCATT CCCATTTCCT
  CCTCCCAGCC TCTAGTGACC ATGAATCTAC TTTTCATTTC ATAGCTTAGC CTGCTCTGGG
  CATTCCACAC AAAGTGGGTT CTGCAATGTA TGCATGGTTT CTACTTTTGT GGATGGCTTC
  TTTCAGCTAT GATTCCATAG CATTTTGAAC ACATCTCACT GAGCACTTAC CTTGTTTTTT
  R
  CTAGGGATGG AAACCAGCTG TCTTAGTGAG CATTTCTATT CCTGCACAAA CATCATGACC
  AAGAAACAAG TTGGGGAGGA AAGGGTTTAT TAGGCTTACA CTTCCACATT GCTGTTCATC
  ACCAAGGAAG TCAGGACTGG AGCTCAAGCA GGTCAGGAAG CAGGAGCTGA TGCAGAGGCC
  ATGGAGGGTG TTCCTTACTG GCTTGCTTCC CCTGGCTTGC TCAGCCTGCT TTCTTATAGA
  ACCAAGACTA CTAGCCCTGG GATGGCACCA CCCACAAGAG GCCTTTCCCC CTTGATCACT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39098253	mCV24398405	ABI	CRAMUS_MOUSE	f	SNP		A	A	G
ss136155482	ENSMUSSNP1456418	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33883595					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:120103555 () rs orientation: forward

Symbol	Name	Function Class
Ccl28	C-C motif chemokine ligand 28	within coordinates
Gm60502	predicted gene, 60502	1880 bp downstream
Rr270688	regulatory region 270688	955 bp distal
Rr270689	regulatory region 270689	646 bp proximal
Rr282566	regulatory region 282566	1069 bp distal
Rr282567	regulatory region 282567	246 bp proximal