rs33887365 SNP Detail

Summary

• ID
  rs33887365
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31425398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAC TGTGACAGTG TACGGTAATG
  Y
  ACCATACACT AACCCACAGA GCTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39558768	mCV23346945	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145458059	ENSMUSSNP4171801	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss325358911	CHEV_17_31343369	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33887365					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31425398 () rs orientation: forward

Symbol	Name	Function Class
Rr339574	regulatory region 339574	1002 bp proximal
Rr370213	regulatory region 370213	1267 bp downstream
Rr370214	regulatory region 370214	1397 bp upstream
Tssr143654	transcription start site region 143654	1625 bp upstream
Ubash3a	ubiquitin associated and SH3 domain containing, A	1449 bp upstream