rs33887898 SNP Detail

Summary

• ID
  rs33887898
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76475783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGT CTTTCAAGCT CTGGTACTTT
  K
  TTGCTGTGGC TCTAGCAGGC AACAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss39612666	mCV24815525	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss325700425	CHEV_18_76502366	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33887898					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76475783 () rs orientation: forward

Symbol	Name	Function Class
Rr347326	regulatory region 347326	1783 bp distal
Rr347327	regulatory region 347327	1018 bp proximal
Tssr151998	transcription start site region 151998	343 bp upstream