rs33889055 SNP Detail

Summary

• ID
  rs33889055
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128532114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTC TCTTTCATTT TTGAGGCTTC
  Y
  TTAGTGTCCC CTTCCTTTCT TCTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45085165	mCV23203749	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss319965273	CHEV_1_130500954	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33889055					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128532114 () rs orientation: forward

Symbol	Name	Function Class
Rr366987	regulatory region 366987	1499 bp upstream
Rr396265	regulatory region 396265	1636 bp upstream
Rr417789	regulatory region 417789	1037 bp distal
Rr417790	regulatory region 417790	1412 bp proximal