rs33891780 SNP Detail

Summary

• ID
  rs33891780
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:130273929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG TCTCGGCCTG CAGGTAAAGA
  R
  GCTAGCAAGC TGAGCACCAG CATCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45634992	mCV22588761	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss147462182	ENSMUSSNP6273523	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33891780					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:130273929 () rs orientation: forward

Symbol	Name	Function Class
2900017G11Rik	RIKEN cDNA 2900017G11 gene	within coordinates
Rr600533	regulatory region 600533	464 bp proximal
Snrnp40	small nuclear ribonucleoprotein 40 (U5)	within coordinates