rs33891882 SNP Detail

Summary

• ID
  rs33891882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3688296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTGTCACT AGACCTTGTC CTAGAATCTG TAATAAGCCT TGACAGGAGA GTCCCTGACT
  AAAAATGATG GCTTTTTAAA AAGGAAAGGA GAACTTTTAG TAAGGAACAG CCCCTTTCAG
  TTAAAGGCAG CATCCTGACA CTCTTTTTAA AGCATCTATC TATCTATCTA TCTATCTATC
  TATCTATCTA TCTATCTATC TATCTACCTA CCTACCTACT TATCATCAAT TTATTATCTA
  TCTATCTATC TATCTATCTA TCTATCTATC TATCTACCTA CCTACCTATC ATCAATTTAT
  Y
  ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTACCTATCT
  ACCTACCTAC CTACTTATCA TCAATTTATT ATCTATCTAT CTGTCTGTCT GTCTGTCTGT
  CTGTCTGTCT GTCTGTCTGT CTGTCTAGGT TTCTCAACAG GGTTTCACTG TGTAGCTCTG
  GCTATCTTGG AACTAACTCT GCAGACCAGG GTGGCCTTAA ACTCAAAGAA ATCCATCTGT
  CCTGTCTCTA CCTCCTGAAT TCTGGGGATT AAAAGCATGT CCCACCACTG GCTGTAAGAA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45654654	mCV23809095	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33891882					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3688296 () rs orientation: forward

Symbol	Name	Function Class
Lyn	LYN proto-oncogene, Src family tyrosine kinase	within coordinates
Rr104512	regulatory region 104512	1541 bp proximal
Tssr36344	transcription start site region 36344	368 bp downstream