rs33892291 SNP Detail

Summary

• ID
  rs33892291
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:130272421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATA AGTTTTAGGC CAGGCCTGGT
  R
  AACACTCATT CCTTTAACAT CAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	LG/J	SM/J
ss45720661	mCV22588770	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147462169	ENSMUSSNP3682779	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss321317888	CHEV_4_130055875	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	LG/J	SM/J
rs33892291					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:130272421 () rs orientation: forward

Symbol	Name	Function Class
2900017G11Rik	RIKEN cDNA 2900017G11 gene	1282 bp upstream
Rr600531	regulatory region 600531	1742 bp distal
Rr600532	regulatory region 600532	936 bp distal
Rr600533	regulatory region 600533	1972 bp proximal
Snrnp40	small nuclear ribonucleoprotein 40 (U5)	within coordinates