rs33894723 SNP Detail

Summary

• ID
  rs33894723
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:4524314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACT CCCCCAAAGC TCCGCCCACC
  M
  AAGCCCACCC ACTGCGACCT CATCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46053034	mCV22879946	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss148179422	ENSMUSSNP2783402	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
ss322094962	CHEV_7_4472917	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33894723					SNP	C	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:4524314 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18237	CpG island 18237	212 bp proximal
Dnaaf3	dynein, axonemal assembly factor 3	1618 bp downstream
Rr641975	regulatory region 641975	114 bp proximal
Rr641976	regulatory region 641976	1203 bp proximal
Tnni3	troponin I, cardiac 3	within coordinates
Tssr64334	transcription start site region 64334	1904 bp downstream
Tssr64335	transcription start site region 64335	833 bp downstream
Tssr64336	transcription start site region 64336	355 bp upstream
Tssr64337	transcription start site region 64337	498 bp upstream
Tssr70484	transcription start site region 70484	561 bp downstream
Tssr70485	transcription start site region 70485	1112 bp downstream
Tssr70486	transcription start site region 70486	1484 bp downstream
Tssr70487	transcription start site region 70487	1501 bp downstream