rs33894909 SNP Detail

Summary

• ID
  rs33894909
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:4781758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGC ACTCTCAGCA CTGGGAAGGC
  R
  AAAGCAGGAG GTTCAGAAGT AAGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46074760	mCV24211348	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss322095147	CHEV_7_4730361	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33894909					SNP	G	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:4781758 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18251	CpG island 18251	1078 bp distal
Il11	interleukin 11	within coordinates
Tssr70541	transcription start site region 70541	615 bp upstream