rs33895042 SNP Detail

Summary

• ID
  rs33895042
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30816788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGCTCTCGG ATGTAATGGC CAGGTATTCT GAGCTGTGCA
  AGGGAAGGAA AGGCAGACAG TGACCCTCCG GGCCCAACCC TGAATAGAAT GGGATAGACT
  W
  GAGTCCCTGC CTTAGGCCCC CGGGCCCCCG AGATTAGAGA GGGCTGTGGA CTGGGCTCCC
  CCCCCCCCGC CCCGAGTCTG AATGAGAGGC CTCTAACTA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46091469	mCV24562305	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss148699942	ENSMUSSNP3764742	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss322139449	CHEV_7_31902382	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33895042					SNP	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30816788 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18835	CpG island 18835	1239 bp distal
Scn1b	sodium channel, voltage-gated, type I, beta	within coordinates
Tssr71934	transcription start site region 71934	459 bp upstream