rs33896807 SNP Detail

Summary

• ID
  rs33896807
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102557686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACGT GGAGACTGAA TGGGCGATAT
  K
  CCTTGTGAAC ACAAAGCTGT ATAAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46329501	mCV25294111	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss136872911	ENSMUSSNP3137127	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss323158824	CHEV_9_102582817	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33896807					SNP	T	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102557686 () rs orientation: forward

Symbol	Name	Function Class
Gm46150	predicted gene, 46150	within coordinates
Rr192177	regulatory region 192177	315 bp proximal
Rr202371	regulatory region 202371	1976 bp distal
Rr207053	regulatory region 207053	916 bp proximal