rs36244647 SNP Detail

Summary

• ID
  rs36244647
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127724465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGAGTCACA GCCCGTGATG AAGACATACT TGTCTTGGAG
  ATGGCTCACC ACCTGCCTCT CCCTGAAGAA GCGCAGGAGC GTCCACAGGC CCACCAGTGC
  M
  ACCAGGTAGA GCCACATGGT TTGTAGAAGT CAAGCAGAGA GAGATATTCT GTGTCAAAAT
  GAGCCTGGCC TCTGCTTACA CAGGAAGGTA TAGGCACTGA                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50945991	NES14148146	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36244647					SNP	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50945991	NES14148146	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127724465 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	within coordinates
Tssr99826	transcription start site region 99826	48 bp downstream
Tssr99827	transcription start site region 99827	92 bp downstream