rs36250228 SNP Detail

Summary

• ID
  rs36250228
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63372845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCCTTAT TTGACTGTGG
  TTGGGTATAG ATGATAACTG AATAAACAGG TCTATGACAA ACTACCTCTC AAGTGGCCTT
  CTGGGTTTGC CTTAGCTACT TTTCAAGTCA GAACCTAATA AAACTTTGCT ATGTATGTCC
  AACAAATATC CATCACATAC ACTAAAGCTA ACTAGCGACC CACAATACAC ACAGGGCTTA
  R
  TAAGCAGCCA TGGGACAGAG GAGATAACAA CTCATTAGCA CAATATCGTA AGCAAAGTAT
  CAGGTAGACT GAATGCCCTC TAAGGACACA GTGTCACTCT TCCAAAAGCC AGGCAACTTG
  TTCCTGCTCT AAATCACAGG CTTTCGTTTT ATGTCAGCTT CTGGGTGGGG CACCATCGGA
  TCCACAAGGC AGGCAGGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52026043	NES15043067	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36250228					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52026043	NES15043067	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63372845 () rs orientation: forward

Symbol	Name	Function Class
Gm16759	predicted gene, 16759	within coordinates
Iqch	IQ motif containing H	within coordinates
Rr204519	regulatory region 204519	68 bp proximal