rs36255483 SNP Detail

Summary

• ID
  rs36255483
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:36791440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGTCAAG AAAGAAATGC
  GCAGTACAGG AGGTATATTT TAACCCTGTG ACCAAGGCTG CTGAGGTGCT TCCTTCATTG
  GGGACACGCT TGTCTTGTAG GCCTGCTGTC CGGAGTTCAG GCTCAGGGAC CCTTGCAAAG
  GCAGAAGGCC TCTTCAAAGT TACCCTCAGG CTCAACAAGT AGGCCGAATT GCATAAGCCA
  Y
  AATGAGCACA TTATACGTGA TCATAATAAG AATACTAATA AACGGGGCCT AGCAAACACA
  GAAGTGGATG CTCACAGTCA GCTATTGGAT AGATCACAGG GCTCCCAATG GAGGAGCTAG
  AGAAAGTACC CAAGGAGCTA AAGGGATCTG CAACCCTATA GGTGGAACAA CATTATGAAC
  TAACCAGTAC CCCAGAGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	MOLF/EiJ
ss50779093	NES13544442	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	MOLF/EiJ
rs36255483					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50779093	NES13544442	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:36791440 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10781	CpG island 10781	1421 bp proximal
Gm56662	predicted gene, 56662	within coordinates
Rr357666	regulatory region 357666	640 bp distal
Rr362011	regulatory region 362011	1754 bp distal