rs36260656 SNP Detail

Summary

• ID
  rs36260656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131076942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGTGAGTA CCACACAGGG
  ATGCTTTATT TACAAGACTT CAGTGTATCT TTTGTACAAA TATAGTCACC TTGTTACATA
  ACCACGCTAC GGCCATCAAC TTTTACAAAT TTAAATCTGA GTCATTTCTC TCTAATCTAT
  TAGGTGCTCT CCGATTTACT TAATTCAATC CACAATGCCC TTTCTAGAGG CTTCTTTGTT
  Y
  GCAGTGAACT CGGGCCAGGT GGTGCGTCTA CCTTGTCTCT CACAGCACGC CAGTAGGCTC
  ACCTTCCTGG AAGTGGCCCC AGGGAGCAAA AGGCAGAGGA CAGTGTTTTT TCTGACCTTG
  CTGTAAAAGC TTACCAGTGC GGTTTACATA GCAGCCTGGT GTTTGCATGG GCCCGTATTG
  ATCAGTGTGG GAGGGAACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51633038	NES14658225	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36260656					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633038	NES14658225	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131076942 () rs orientation: forward

Symbol	Name	Function Class
Gm18492	predicted gene, 18492	675 bp downstream
Rr585318	regulatory region 585318	within coordinates
Rr585319	regulatory region 585319	522 bp proximal