rs36263033 SNP Detail

Summary

• ID
  rs36263033
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69470247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTAACTA TTTAAAAAGC TCATGGGTTT
  AACCATTTGC ATACACATAG GAAGAACATG CAGAGTGCAA ATCTAGCTGA TGGTTTCATT
  TTGCATTCAT GCAGAAATTA AATTCTTACT GTCAGGGTCC TCTTATTACA GGAAACTAgc
  K
  tcctagataa agattattaa gaatatttca taatcctttt ttgtagccaa ggttaagaac
  caGGAAGCAT GGAGTTAAAC AGACCACAAT CAGTAAGGTA GGACTTGGTT ACCAAGCATG
  GGACAGGATC AGACAGGCTA AGAACCTGCT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51265532	NES14271220	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	G	T	G	G	G		T	G	G	T		T
ss319781368	CHEV_1_69477662	CHEVERUD	SCREENING_POP	f	SNP											T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36263033					SNP	G	G	T	G	G	G	T	G	G	G	T	T	G	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51265532	NES14271220	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69470247 () rs orientation: forward

Symbol	Name	Function Class
Gm28497	predicted gene 28497	138 bp upstream
Gm69966	predicted gene, 69966	175 bp upstream