rs36264908 SNP Detail

Summary

• ID
  rs36264908
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70928236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAGGCTC AAAAGTGCAC
  AAGCCATAGG GAGTTAGCTC AGTGGTAAAC CTGCACTGGT CCAGTTCTGG GTTCTAACTT
  CAATCCATAG TTCTAGAAAC AGAAGGAAGC AAAGACAGAG CATAAAAGCA TCTTTCCTGG
  GTGGGTCCAG GGCATCAGTA TTTTAACCTT CTTCCTGATT CCACAAAGGG AGCTGAAGCA
  Y
  TGATTGGCAA ATTCATCAGC TCTGGCTAGG AGGAGTCAAC CAAATCAAGT GTAGAGTTAG
  GATGAACCAT AACATTCCAT CTGTCACCAA GTTCCTCCTT CTCATCACCA TGGTCACCAT
  TTATGAGAAA ACACGTATGG GGTGCCTATT AACTGAAAGG CATCTCCAGT CTCACAAACA
  GAGGCAAGGC AAAAGGCCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51673407	NES14828326	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	C	C	C	T	T	T	C	T	C
ss133273547	ENSMUSSNP5472378	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36264908					SNP	C	C	C	T	C	C	C	C	C	T	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51673407	NES14828326	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70928236 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	123 bp upstream
Gm66915	predicted gene, 66915	within coordinates
Tssr61339	transcription start site region 61339	42 bp downstream