rs36266227 SNP Detail

Summary

• ID
  rs36266227
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:17396877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATAACATT GTTTTGAGGA
  CAAAGGTTAT ATTTTGACAA AACTAATTTA GTGTTTTCTG AAGCATATTT TTGGAGTCCA
  AATGACTATT CTTGATGGAA TCTCTCTAAA CAGGCCCTCA TTTTTGCTTA GACCAGATCA
  TTCTGACTGA CAAATAGAGT TTTTCTTCTT TGTTTAAAAG TCTTGGCAGA AATGTATGAC
  Y
  GCCGCAGCTA TGGATTCTTT CGTCCCCTTA TATCCTCTGG GAAAAGGGCC TACTTTCCAG
  GGGCAATCAT AGTAGATCTT CCAGAAGCCA TAAAACTAAT AAGGCAATAA GGACATCTAA
  ACTCCAGCAG TTTTGAAGAA AATGACTTCT TAAAACTCTG TTTCTTTTAG AGTTGCATGA
  GATCAGCATG GTAGGAAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50826682	NES14197832	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36266227					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50826682	NES14197832	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:17396877 () rs orientation: forward

Symbol	Name	Function Class
Gm47769	predicted gene, 47769	within coordinates
Gm53271	predicted gene, 53271	within coordinates