rs36271003 SNP Detail

Summary

• ID
  rs36271003
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70314384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGCTGCTG TGGTTCACAC
  GAAAGTGGCT CTCAGGGCAA GCCAAGTGTT TTAAGGACTG GCAACATTAA CAGATGTTAA
  TAAGGGACCT GGCCCCGAGT CCCTATGGCC AGGGACAAGT GGCAGTGTGG CCCTAGGAAG
  ACTAAAGGAG AAAACAGGAG ATGCAGGAGC CTGAGCAGTG GGCACTGCTT GGTTGCAGCC
  R
  TTCCCTGGGA CAGACCAGCG AGTACTGGCT GATCCTGTTG TCAGGCTGGA TGCGCACAAA
  GAGAATGAGA GTAGAGAGCC CTGACCAGAG TCTCATACCC CAGATTCCTC TAAACTCAGC
  TGCCTTCTCA AGCAGAATTA GAACCTCACC TACTCAAAAA CCTGTCAGGA GGCATGGCCC
  CAGTATCCTG AGGCATTTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52027690	NES15045283	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36271003					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027690	NES15045283	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70314384 () rs orientation: forward

Symbol	Name	Function Class
Ccnb2	cyclin B2	590 bp downstream
Mir5626	microRNA 5626	1349 bp upstream
Rr197017	regulatory region 197017	1617 bp proximal
Rr204787	regulatory region 204787	331 bp proximal
Rr204788	regulatory region 204788	1616 bp proximal