rs36276633 SNP Detail

Summary

• ID
  rs36276633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:10697337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAATGTGC CTGTGCCATT
  ATTTCCACAG GACTCAACCA CTGGCTTTAT TTAGCTTGGG CATTCCCCTG CTCAATTCAG
  AGTAAGTCAG TGAATCATTT TCTCCATCAT CTATCTCTGG ATCATCACAC GAAGGGCCTT
  AATCACCGAG GACCAAACAC TCAGTAAGTT ATATCCTTCT TGTCCTAGCA TTTGAAAGAT
  Y
  AGATATAAAA GGCAGGTTGA TTTTATTAAT TCTCTTTTCT CAAGCTAATG TAATTCTCAA
  TCAGAGCTTA ACCTCCTATA ATTATATCCT TAATCAAAAT ACTTTGATAA TTCCTATAAA
  GCCTTATTTG TAATATAAAA ACATTAGACT CCCAATTATT ACATATCCAT TGTAGACTGA
  AGCAATGCTT TTTTCAGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51581068	NES14611439	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	C	T	C	T	T	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36276633					SNP	C	T	T	T	C	T	C	T	T	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51581068	NES14611439	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:10697337 () rs orientation: forward

Symbol	Name	Function Class
Gm52214	predicted gene, 52214	within coordinates
Rai14	retinoic acid induced 14	within coordinates
Rr301959	regulatory region 301959	1064 bp proximal
Rr306144	regulatory region 306144	1264 bp proximal
Rr312694	regulatory region 312694	within coordinates