rs36278408 SNP Detail

Summary

• ID
  rs36278408
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70638767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGTGACT TTGAATTCCT
  GTGGTACATG GGATAGTCAC TGGTATAATC TAGTGGCTAT TTTAATAATC CAAGGCAGAA
  AGTAGTAGAT AGCCCTGAGT ACTTATTAAA ATGAGAGGGG GGGAGATAAT TATCTTTCCA
  ACAATAGGTT GCCCTTGACT TCATGATGAA AGTAAAGATG CTCTTGGCCT TTGCCAGATG
  R
  TGGATTTTAG AGGAACTGAT TTTATTAAAA ACATTCTTTT TTTCCCCATT AATCAATTTA
  TTCACTTTAT ATCCCATCTC CTCCTAGTCC CGCCCTCACA GGCCCTTCCC CTGTCCCTCC
  ATCCCTCTCT GAGAAAGGAA GGGGAAGTCC TCCCTGTTAC CAACCTACCC TGGCACCTCA
  AGTCACTGCA GGACTAAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52027516	NES15043569	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36278408					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027516	NES15043569	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70638767 () rs orientation: forward

Symbol	Name	Function Class
Adam10	a disintegrin and metallopeptidase domain 10	within coordinates
Rr201557	regulatory region 201557	1567 bp distal
Rr201558	regulatory region 201558	967 bp distal
Rr201559	regulatory region 201559	167 bp distal
Rr210505	regulatory region 210505	34 bp proximal
Rr210506	regulatory region 210506	1366 bp proximal
Tssr85932	transcription start site region 85932	1573 bp downstream