rs36289303 SNP Detail

Summary

• ID
  rs36289303
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:87018568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGAATCCC TTACTGACTC
  ATTGATCATT CTACAGCTCC TTCATATTAT TCTATGTTAG CCAATATGCC AGATCTAAGT
  GTATTTGTAG GTAGAGCCAA GTTTTGGTTG ACGTTGAGTT AGGGTCAATC TATAATTATC
  CCAGAAATAT CTGTCATCTT TCTTATGACA GCAGAATGAT GACTTATTTA AAAAGTGACC
  S
  TAAACTCTTT CTCCATTTTT GAAAGGTTCA GGAGAATCTG ATGACTTAGT AATGGTGCTA
  TCTGTTCAGA TAAATGATTT TCTTAAAATA GCCTCTCAGT TCTTATCCAA TCAGAGTGTT
  TCATTCACTG GCACTAGTTT TGGGAGGACT GAGTTAGCCA GAACTAGATT AGCTAACTCT
  GTGACAGGCT GCAAATAGGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50555432	NES13667370	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	C	G	G	G	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36289303					SNP	G	G	G	G	C	G	G	G	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50555432	NES13667370	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:87018568 () rs orientation: forward

Symbol	Name	Function Class
Rr394020	regulatory region 394020	16 bp upstream