rs36289709 SNP Detail

Summary

• ID
  rs36289709
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:10970187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAACCTTG CCTGCTACCA
  AGTGACTCAT TAGAGGACAC AGGAATTCTG TTATAAGCTG CTGTCAATTG TTCTTCTTGG
  TTGTTGTGTT ATTTTATTTT ATTTTATTAT TTTATTTTAT TTCTCATTGG TATTGGGATG
  GAAGCTAGGC CCTGTGCTTG CTGGGCAGGC CCTGTGCTGG GAAGACCCTG TGCTAGGCAG
  R
  TGCTTGCTTG CTGGGTAGGC GCTGTGCTGG AGAGGCGCTG TGCCACTAAG CTATGTCCTT
  AGCCCTCTTT TTACTTTTTA TTTTGAGACA GGAGCTCTGC AAATTATCCA GGACAGTCTT
  GATCTTTCGG CCCTCCTGCT TCGACCTCCT TAAGTAGCAA GGATTACAGA CTTCTATACC
  ACCCTTTCAC CCTTTCTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51942748	NES14965317	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36289709					SNP	A	A	A	A	A	A	A	A	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51942748	NES14965317	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:10970187 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd130e	DNA segment, Chr 8, ERATO Doi 130, expressed	65 bp proximal
Gm32594	predicted gene, 32594	within coordinates
Gm44955	predicted gene 44955	within coordinates
Rr659385	regulatory region 659385	1147 bp proximal