rs36292161 SNP Detail

Summary

• ID
  rs36292161
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:45163313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCATATAT TTAATTTCCA
  TATCATCCTT TAAAAGTTAA ATTTGTGGAT TTTTAAAATG TGAAAATAAA CAAATAAATG
  AATATGTCCC ATAGTGAGAA AAAACATTTG GGAGACAAGA ATATAGTTGT ATAATACAAA
  ACAATAAAGA AAATAAGCAG AAGTTATTTG CTTTTCTGAA CAACTGCAAA TCCTAGCCAA
  M
  AGTCCCTTTT CTCTGCCTTG CCACTAATTT AACTGATGAA CAGCTAGCTC ATGGCTGATT
  TATTCTGTGT CTGATGTCTT ATAAAGAACA AAGAAGTTAG CCTTGAGGCA AAGTGGAAAC
  AAGACCATAC ATGTTTCAAA GCAAAGCATT AGCTATTAAT GAATATAAGT TTTGTTAACT
  ATTAAACACT CAATGATAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51953166	NES14875931	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36292161					SNP	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51953166	NES14875931	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:45163313 () rs orientation: forward

Symbol	Name	Function Class
Rr382009	regulatory region 382009	1120 bp upstream
Rr662787	regulatory region 662787	398 bp distal