rs36306693 SNP Detail

Summary

• ID
  rs36306693
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:34567354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATTACTT AGGTGGCTGG
  CAGGTTGAGG CAGACCGGCG ATAAGATAGT GACCTAGAAG GGAAGAGCCC AGTGAAGAAG
  GTGTTGAGAG TAGAGGCTTT GGATTTATGA TATGTGTTTG AAAAGCAGGA AGTGATGGGG
  TTGGGGGGGC GGCGAGAGCA AGCATGACGG AGGTGATGGG GCTGTATGGA ATAAGGCACA
  Y
  CCAGAATATG CATGCAGGGC AGATGTTAAA GTACCAAGAT TAAGAAGCTA GGAACTGGTG
  AAAATATAAA GCTAAGTCAC CTCTTTGGTT CTTGCCTGAG AGGGTTTGAG AAACATGGCT
  TTTTAATTTG CCAGCCTCCA CAGTCCAGTA GGTTAAAACA GAAGGAGACG TGGGACAAAC
  CAGTCTACCC TTAAACACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss51080071	NES14355224	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs36306693					SNP	T	T	T	T	T	T	C	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51080071	NES14355224	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:34567354 () rs orientation: forward

Symbol	Name	Function Class
Rr275700	regulatory region 275700	within coordinates
Rr275701	regulatory region 275701	447 bp proximal