rs36307679 SNP Detail

Summary

• ID
  rs36307679
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62310874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGGGACA CGAGTGAAGT
  TAGGGAAGGC ACAGGTTTGC ATCTGGAGCT CCGAAGACAC ACACGGAAGG GCTAGGCACG
  GTGCATGCCA TTCTGGTACT CTTACACATT AAGCCACTCA TCGGTCACGA CACATAGTTT
  ACCTGTGGTT TCCAGTGGGA GAGACAAGGA CACTCCAGAG TCAAGAGGTT TTGAAGAAAC
  R
  GGTGCAATGA AGTCATGGTT AAACAATTTA TTTACTGTAA ACTTTAGACT TTTCTCAGCA
  AAAAAAAAAA AAAAACCCAA AAAAACAAAA ACAAAAACAA AACCCCAAAA AACAACAACA
  AACCAAAAAC GAACCAAACA AACAAAAAAA CAAAAACAAA AACAAAAACA AAACAACTGA
  TGTTGTCCCT CAAATCCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50422444	NES13457548	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G		A	G	A	G		G
ss325649279	CHEV_18_62337457	CHEVERUD	SCREENING_POP	f	SNP									G					A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36307679					SNP	G	G	G	G	G	G	G	G	G	A	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50422444	NES13457548	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62310874 () rs orientation: forward

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	13 bp downstream
Cpgi10125	CpG island 10125	1163 bp proximal
Rr393783	regulatory region 393783	1796 bp upstream
Rr539062	regulatory region 539062	within coordinates
Rr539063	regulatory region 539063	1315 bp distal
Rr539064	regulatory region 539064	1088 bp proximal
Rr539065	regulatory region 539065	1199 bp proximal
Tssr153622	transcription start site region 153622	57 bp downstream