rs36310467 SNP Detail

Summary

• ID
  rs36310467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16725275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCCTAGC TAATTATTCA
  ACAGTTACTT CAGTGATTTA GATGGGGATT GGGTTACCTT TGGGAGAAAG GATTGTGCTT
  TTAAGTCATG CTAACTAACG ATTATTACTA AAAATTATAT AGGAGTGTTA CTGTTAACTC
  TATCCCAAAA GGTATAAACA CACTCGTGGC TCTCCAGTCT AAAGCACAAA GTGCTTTACA
  Y
  AGATACACTT GTCAAGTCTT TGAAATTAGC TGCTTGCTTC AAATGTGCAA GAAAGGAGAG
  CTTTACTCAA TTTGGGCATT GTTGTGCTTC TTAAATTTTC TTTTTATAAA GACAGTCTTT
  TCCAGACACT TGGACAATAC TAAGTATTAA CTTGAAACCA AACCAAAGGA CATAGGTCAG
  GCTGGTGTTT CATGAGTGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51245241	NES13797376	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36310467					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51245241	NES13797376	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16725275 () rs orientation: forward

Symbol	Name	Function Class
Gm67409	predicted gene, 67409	within coordinates
Rr406953	regulatory region 406953	622 bp proximal
Rr626719	regulatory region 626719	1934 bp proximal