rs36310708 SNP Detail

Summary

• ID
  rs36310708
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:101690612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTAGACC ACACATTGGA
  TGGGGATCTC TGTCCAGCTC CAGGAGGATC CCAAAGGCCC TAGCTCACAG GAGCACCTAC
  AATCATGTTC GCATAGTCAC ATGTATATGA ACACATACAT GCATGTAATT AAAAAGTGTA
  AAAAAAAACC TTAAAGAATA ATGTATTTGA GCAGATGACC TTCCTTCAAT CTTTATTATG
  W
  AGGTTGCAGA CATACTTGCA TTCCTTTTCT TCTAAATGAG AAATCTAACC TCAGTATGTA
  GCTATCGTAA TCCTTTGTTC ATAGGTAGGT GTGATAGATA ACTCTTTGGG GGTTTGTTTT
  GTTAAGTTTG TTTGATTGGT TGGTTGGTTG GTTGGTTGGT TGGTTGGTTG GTTGGTTGGT
  TGGTTCGTTG ATTTTTTGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	WSB/EiJ
ss51142159	NES14336220	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	WSB/EiJ
rs36310708					SNP	A	A	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51142159	NES14336220	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:101690612 () rs orientation: forward

Symbol	Name	Function Class
Gm36475	predicted gene, 36475	within coordinates
Gm47533	predicted gene, 47533	within coordinates
Tssr4154	transcription start site region 4154	1873 bp upstream