rs36315448 SNP Detail

Summary

• ID
  rs36315448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79512737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGTGCCC TCTTCTGGCC
  TCTCTGGGTG CCAGGCACAC ACATGGTGCA CATGCATACA TCAACCAAAA TACCCATGCA
  CATAAAACAA TAAGTAAATC TTAAAAAAAA AAAAAGGAAA GCTGTAAACT TGAAGTAGGA
  CAGAAAGACA GAAAATGATG GTGGCATGAG AAGGGAGATG AACCCAACTA CCCCAGAGTC
  Y
  GATTGATGTC TCACCAACTA AGCAAGAAAG CCAGCACATC TGCTGGAAAG TCGGGTCATC
  AGATCATCCT CACTACCCCT TTCATATGCA GGCACTTTAT GTTAAAGAAG CAGTTAAGGC
  CTGAATGTGT ATGACCCTAG ACAGAGCCTC ATTCCCTTCT CTGCATGTAG CATGCAATCT
  TGACTACACT TAGCTTGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51725082	NES14567286	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36315448					SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51725082	NES14567286	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79512737 () rs orientation: forward

Symbol	Name	Function Class
Fam227a	family with sequence similarity 227, member A	within coordinates
Rr390973	regulatory region 390973	within coordinates
Rr505687	regulatory region 505687	372 bp distal
Rr505688	regulatory region 505688	178 bp distal