rs36316577 SNP Detail

Summary

• ID
  rs36316577
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72263557 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTGCTCTG TTCTCTGCTT
  CATCTAGTTT GTTTGTGATA AGTTGCATTG TGCTTATTAT TTTATTATAT TTTTCATTTC
  TACAGTTGCC TTGCTTTTTA ACCTTTCTTG TGTTTCTGAG TTGTGGCTTA TGTGTCCATT
  GGGATGAATA TCTTTCCCAG TTTACTTAGA AGTAGGCAGC CTTCTCTCTG AGGCCTCAGT
  S
  TATAGTACTA CTCCAAGAAT TAATAGGCAA CAAAACAAGG CATGGAAATA GAATTCAAAT
  CAATTAAAGC CAGTGACTAA TAGAAAATAA AATGGCACAG GCCAGCAAGG TGGCTATCAG
  GTAAAGGCAT GTGCCACCAA GCCCATAGAC AGACTCCTAC AAATTGTCTT CTTATCTCAG
  CACATGCACA TGATAAACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	WSB/EiJ
ss50743294	NES14241838	PERLEGEN	MM_PANEL2	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	WSB/EiJ
rs36316577					SNP	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50743294	NES14241838	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72263557 () rs orientation: forward

Symbol	Name	Function Class
Gm37303	predicted gene, 37303	within coordinates
Gm37581	predicted gene, 37581	952 bp upstream
Tssr85980	transcription start site region 85980	1499 bp upstream
Zfp280d	zinc finger protein 280D	within coordinates