GAATGTTCAG CAATTTGTCT CGTGTAGGGG ACCTACAACC ATTTGTGACT ACGTGTCCAT GGGATTGGAT GTTCTTTCCT AGATCCACAG TGCCATTCAT GTTTGTAGTG CAAAACACAC ATATCCATAA AATAACAAAA AAATTAAAAG GTAGATAATC CACTAACATG GAAGTTTAGC AACTCCTTGT ATGTTTTATT R TATGGCATAG TTTGCCAATG GCCACACATA AATTGGTTCT CAGCAGCACC AATGCAATGA CTAACACACT TTGTTGCATC ATGCAGACTA GCATGTCACT CAGCAACATG ATTTGCATTT TAACCTGGAA TCTCCATTAT GGATCCTGTC CATCACTGAT CAAAAGTATC GCTATGTATT GTGTGACTGC ATGTGTTTGG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51106816 | NES13870964 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | A | G | G | A | A | G | A | A | G |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36318962 | SNP | G | G | G | G | G | G | A | G | G | A | A | G | A | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51106816 | NES13870964 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr5:49288980 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Kcnip4 | Kv channel interacting protein 4 | within coordinates | ||||||
Tssr50936 | transcription start site region 50936 | 566 bp upstream | ||||||
Tssr50937 | transcription start site region 50937 | 388 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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