rs36321363 SNP Detail

Summary

• ID
  rs36321363
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:72833614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGTTTAA GCTTCAGTTT
  TACTTTCTGA TCCACACTCG TTACTTTGTA GCTTGTTTTC ACCTCATACC TTACCAACCT
  TTCTGCTTTC CTGCTCTCTA ACTCTCATCC CTCGCCACCT TCACCCAGTC TTTCCTTCCT
  TTTTGCTTAA GTAGGCAGCC TCTTCTCAGA AAATCCTGAC GCCATAAGAA AAGAGCAAAT
  Y
  CCTAGCTTTC CTGATGCTGA GCCAGCAAAC ACCCTCCCAG CTGTGCACAC ATTCTCGCCT
  CTCCCTTTGC AGGGACAGGA GAAGACCGGA CCCTGCCGGC TCTGGCTCCG TCTTCCTTAG
  TGTGCTTTGG ACCTGGCCTT GGTCTCCCTG AAGCTCTGGC CGGGGATGTG CAGCCAACTC
  CCAGCCTTTC CTAATGAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51500081	NES13951199	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36321363					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51500081	NES13951199	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:72833614 () rs orientation: forward

Symbol	Name	Function Class
Gm20083	predicted gene, 20083	78 bp upstream
Gm28746	predicted gene 28746	1148 bp downstream
Tssr67187	transcription start site region 67187	1900 bp upstream
Tssr67188	transcription start site region 67188	1932 bp upstream