rs36321555 SNP Detail

Summary

• ID
  rs36321555
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACACCATG GAACTGGGAC
  ACCGTCTCTG CAGCTCAATG CATTTCCTCA CAATGGCTAC AGGTTCAAGT CCTGTCTTCT
  CACATCACAC CTAGGCAGGA AGAGCCAAAC TGTTTTCGGT TTCTTGATAC TTCTTTCCCA
  GATTCCCCTC ACATGGCTAT CTACCTCTAG CTGCAAGAGA GTCTGCAAAG AAGGAAATTC
  R
  ACTAACAGGT CTGTATCTGG TCAGCATGGA AATGGACGAT CCGGATCAGC TAAGAACCCA
  GAGAGAAACA AAGCAAACAA ACAAACAACC CAGGTGTGTA AGCCAGGGGA AGGAAATGCA
  TCACAATGTT CCAGGAAAAG GGATTCCTTA AAAGGGTCTC TGAAGTGTAT GATTATAGTT
  GGAACTTCTG TAATAACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50694225	NES13603176	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		A	G	A	A		G
ss325752821	CHEV_19_21670152	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36321555					SNP	G	G	G	G	G	G	G	G	G	G	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50694225	NES13603176	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573026 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	1651 bp downstream
Gm38486	predicted gene, 38486	within coordinates
Gm59243	predicted gene, 59243	within coordinates