rs36322465 SNP Detail

Summary

• ID
  rs36322465
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:25112337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTACTAT AGAAAATGAA AACCGAATTT GACTGAGATG
  TTTCAAGAGT TTCTTGTGAT ACCACTATCT TCTTATATTT CATGAGGCAT TAGCTTGCTT
  M
  TCAGGGAATG GGTAATGGTG CTAATAGGTT TAGTTGTTTC ACAGGAGAGT GATGTGGATC
  AAATTACATA ATGTATACTT GCCAGATAGC TGTAGAGATG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	WSB/EiJ
ss51566220	NES14861518	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	WSB/EiJ
rs36322465					SNP	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51566220	NES14861518	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:25112337 () rs orientation: forward

Symbol	Name	Function Class
Rr379084	regulatory region 379084	within coordinates