rs36327320 SNP Detail

Summary

• ID
  rs36327320
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:64441271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGTCCTT GTGTACCTTC
  TTTCTCAGCA AAAGTGGATA TACTGTCATA ACCATGATTG TAAGAGAGCA AAACTATCTA
  ATGCATTAAA TCCCAGTTCT AATTCATGGT ATGTCCAGTT AGTAGCAAAT ATTTCATCTT
  CTTCCTAATA TTTCTTTACA TAACAAGGAA ATATTATTGA ATTAAAATAA AACCTTCATT
  W
  ATTTTTTGAT TAATCTTTAC CACAGAATAG TGACCTTGAT TTCATGGTGC AGGTAAGTCA
  AACCGACTTT TTCTATAAAA TTTAGATGGA AGCATGTTAT AAATATGAAA TGCTAAGTCC
  CTGGAAACTA ATTTGAACTT TACATTTTTT ATAATAAAAG ATCAACCGAA AATCAATAAA
  TTAAACAACT CAATATTAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51323157	NES13758831	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36327320					SNP	T	T	T	T	T	A	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51323157	NES13758831	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:64441271 () rs orientation: forward

Symbol	Name	Function Class
D6Rck360	DNA segment, Chr 6, Rockefeller University 360	1526 bp proximal
Grid2	glutamate receptor, ionotropic, delta 2	Intron
Rr379493	regulatory region 379493	within coordinates