rs36327613 SNP Detail

Summary

• ID
  rs36327613
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAGCCAA ACTGTTTTCG
  GTTTCTTGAT ACTTCTTTCC CAGATTCCCC TCACATGGCT ATCTACCTCT AGCTGCAAGA
  GAGTCTGCAA AGAAGGAAAT TCGACTAACA GGTCTGTATC TGGTCAGCAT GGAAATGGAC
  GATCCGGATC AGCTAAGAAC CCAGAGAGAA ACAAAGCAAA CAAACAAACA ACCCAGGTGT
  R
  TAAGCCAGGG GAAGGAAATG CATCACAATG TTCCAGGAAA AGGGATTCCT TAAAAGGGTC
  TCTGAAGTGT ATGATTATAG TTGGAACTTC TGTAATAACC CTGATGTATT CAGCTGCAAT
  GGTTCTGATA TTATCTGCTG AATATCAAGG CAGGGCAACT TTCACTATAT ACTGAGTCAT
  ACAATAAGAT GCAACATGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss50694223	NES13603178	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G	G	A		A	A
ss325752822	CHEV_19_21670250	CHEVERUD	SCREENING_POP	f	SNP									A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs36327613					SNP	A	G	G	G	G	G	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50694223	NES13603178	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573124 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	1553 bp downstream
Gm38486	predicted gene, 38486	within coordinates
Gm59243	predicted gene, 59243	within coordinates