rs36345155 SNP Detail

Summary

• ID
  rs36345155
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18301315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTCAGTCAC TTCCACTCTC AGTGCTGCCC CAAATCTTCC
  TCACATTTTC TCTCTTTATG TTTCTTCTCC AACAAAACCT TGAGCAACAC AGATGATAAG
  Y
  ATCGACATGC CCTCAGAGAA CAATGATTCA TCCAGGCGCT GATATCTGCT GACTCCTGGA
  CATGAGTCTG TCAGCATCAA AGAGGGAACC TCTATCTTTC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51882338	NES14899003	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36345155					SNP	C	T	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51882338	NES14899003	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18301315 () rs orientation: forward

Symbol	Name	Function Class
Psg27	pregnancy-specific beta-1-glycoprotein 27	85 bp upstream
Tssr2095	transcription start site region 2095	159 bp downstream
Tssr70834	transcription start site region 70834	193 bp upstream
Tssr70835	transcription start site region 70835	92 bp upstream
Tssr70836	transcription start site region 70836	45 bp upstream
Tssr70837	transcription start site region 70837	within coordinates
Tssr70838	transcription start site region 70838	128 bp downstream