rs36346621 SNP Detail

Summary

• ID
  rs36346621
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:11953943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGCTTCA TGAACATTTC
  TCTGCTTTAT GACAAATGTG GATCTGGTGA CCACTTTCTG TGACCTTGCT CTTATGTCTT
  TGAGCTTATG CAGACTTCTC AGACCTAGGC TTTGATTCAG CCTTCAAGGT CTCCTTTCAC
  CTCTCAGACT TGCATAAAAG TAACATTCAC TGCTAGGTCT TAGACCTGGC AGTGTGAGCA
  Y
  CCCCACATCA AAAGGAAGGT CTTTATCTTC AGCAACCTGA ATAAAACAGA AGACACAATG
  AATTTCCTGT CTATTTCTGT GCCAGGAATT ATGTTAGTTC CACTGCAAAG ATATATGATG
  TATATGTGTG AATGTATGTA TGTATGTATG TATGAATGAA TGATTTGATT ATAGAAGACA
  CCACAAGAGA TAGCCAGATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51583171	NES14600947	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36346621					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51583171	NES14600947	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:11953943 () rs orientation: forward

Symbol	Name	Function Class
Gm34618	predicted gene, 34618	1490 bp downstream