rs36350537 SNP Detail

Summary

• ID
  rs36350537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115454676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGCT TGTCCTGGTG TCAGCCTGAG
  R
  TGACAAGCTT GTCTCCTGGA AAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50798478	NES14206637	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	A	G	A	A	A		G	A	A	G		G
ss137015220	ENSMUSSNP3062839	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss323208661	CHEV_9_115534726	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36350537					SNP	G	G	G	G	G	A	G	A	A	A	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798478	NES14206637	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115454676 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
Gm68176	predicted gene, 68176	500 bp downstream
n-R5s92	nuclear encoded rRNA 5S 92	992 bp downstream
Rr370673	regulatory region 370673	1310 bp downstream
Rr687898	regulatory region 687898	1173 bp distal