rs36357787 SNP Detail

Summary

• ID
  rs36357787
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115454985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCAGACAC ACCCTGACCA
  GAGATCTGGC TGTAATTATG CATAACACAC ACACACACAC ACACACACAC ACACACACAC
  ACGCTACCCT CCCCCACCCC CCTGTTCCTC GGAAGGTGGA CTTGGTTAAT CCCAGGACCT
  CTTTGTCCCT CTTCACATTT TGACCATACT GCGTTGGCCA CTGTTCCCTG TGTTTCGCTA
  Y
  GACTTTTCTG TTTAATGAAC CTACTGAGGA TGGATAGCTG AGCGGAGCAT CTCAGGGCTG
  CCAGGGCCTG GGCTCTGACC CTAATAACTC TGCTAACATT TAGAGAGGAC GGGAAACAGC
  CCAGTGTCAT TATACCTCAT TTGACAGTGT GGCCCGACAT CCTTGATAAA AACAAAGGAC
  TTGGGATAGG ACAAGTAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50798470	NES14206641	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36357787					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798470	NES14206641	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115454985 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
Gm68176	predicted gene, 68176	809 bp downstream
n-R5s92	nuclear encoded rRNA 5S 92	683 bp downstream
Rr370673	regulatory region 370673	1619 bp downstream
Rr687898	regulatory region 687898	1482 bp distal