rs36359085 SNP Detail

Summary

• ID
  rs36359085
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27775227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAAAAA AAATATCTGA
  TGCTATTTGG AAAAGCAAAA AGGAATTTTT AAAAAGAAAG TGACAAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGATGTA CTAACTGTCC
  GAAAATAGGG GAGCTGTGAT GTGACATAAT CAGTTAGTGA TCATGTGCTG TGCCAGATCC
  R
  TCCTCACTAC ATGCCATGTT CAGCACTTAC AAGATCTCTT TGAGATGACA CTGACACTGC
  TCTGTAGTCA GGGCAAGCGT CAGCTCTCTC CCTTCCATGC CACATCACTG CGGAATTATG
  GCAAAGCCTC CAAACAAGCT GAAGTCGCCA TTTAGTTTGA GAGTCCCTTC TCTGAGATGC
  TGAGACCAGA AGTGCTTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51887653	NES14908315	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36359085					SNP	G	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887653	NES14908315	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27775227 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Tssr65346	transcription start site region 65346	614 bp downstream
Tssr65347	transcription start site region 65347	587 bp downstream
Tssr65348	transcription start site region 65348	560 bp downstream
Tssr65349	transcription start site region 65349	500 bp downstream
Tssr65350	transcription start site region 65350	474 bp downstream
Tssr65351	transcription start site region 65351	452 bp downstream