rs36360503 SNP Detail

Summary

• ID
  rs36360503
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:73548609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTTGAGG TCCCACTAGA
  GCAGAGAGAA GGAATGGCTG GTTCCAAATC TAGGGCCATT AACAGGCTGG GAAGAACAAG
  GGAGACACAA CATTTCTGTT TTGTTTTGTT TTGTTTTGTT TTGTTTTGTT TTGTTTTGTT
  TTGTTTTGTT TTGTTTTGTT TTGTTTTGTT TTGCTTTCCC AATCTGGTGC TGTATTAACT
  R
  GAATGCCAGG GTTGGTGAGT AAAATCATCT GAGGAGTCTG AGAAATTTAG CTAGGTCTAA
  CCCTGGGAGA GCCTAGCCGC TTTGCTCCAA AGTCTTTTGA CAGCTCTGTG GTTCCAAGCA
  CAGGTATACA GGTTGATACT GTCTGGGTCT GAAGTGCAGC CAACCACTTA CCACCGTATG
  ACCTGGAGAA TGCGACTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51279106	NES14522875	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36360503					SNP	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51279106	NES14522875	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:73548609 () rs orientation: forward

Symbol	Name	Function Class
Rr27610	regulatory region 27610	1440 bp distal
Rr371510	regulatory region 371510	1257 bp downstream
Rr371511	regulatory region 371511	1786 bp upstream