rs36361769 SNP Detail

Summary

• ID
  rs36361769
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95720486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTAT TGGGGACCCT AGGAAAGGGG
  Y
  ATCGCACATA GCTGGTCCTC TAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51973976	NES14993158	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	T	C	C	T	T	T	T		C	T	C	C		T
ss322809822	CHEV_8_97517758	CHEVERUD	SCREENING_POP	f	SNP											C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36361769					SNP	T	C	C	T	C	C	T	T	T	T	C	C	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51973976	NES14993158	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95720486 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adgrg1	adhesion G protein-coupled receptor G1			Intron
				Noncoding-Transcript-Variant
Rr668146	regulatory region 668146			1888 bp distal
Tssr78941	transcription start site region 78941			1156 bp downstream
Tssr78942	transcription start site region 78942			984 bp downstream
Tssr78943	transcription start site region 78943			921 bp downstream
Tssr78944	transcription start site region 78944			380 bp upstream
Tssr78945	transcription start site region 78945			507 bp upstream
Tssr78946	transcription start site region 78946			535 bp upstream
Tssr78947	transcription start site region 78947			835 bp upstream
Tssr78948	transcription start site region 78948			887 bp upstream
Tssr78949	transcription start site region 78949			935 bp upstream
Tssr78950	transcription start site region 78950			982 bp upstream
Tssr78951	transcription start site region 78951			1733 bp upstream
Tssr78952	transcription start site region 78952			1825 bp upstream
Tssr78953	transcription start site region 78953			1846 bp upstream
Tssr78954	transcription start site region 78954			1892 bp upstream