rs36363772 SNP Detail

Summary

• ID
  rs36363772
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:51726980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAA ATAAATACAT ACTTGTAATT
  R
  CATCTACCAG GCAGATTTAT AACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51665674	NES14579673	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	G	G	A	A	G	A	A
ss147914083	ENSMUSSNP888531	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36363772					SNP	A	A	A	A	G	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51665674	NES14579673	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:51726980 () rs orientation: forward

Symbol	Name	Function Class
Eif3h	eukaryotic translation initiation factor 3, subunit H	Intron
Rr404375	regulatory region 404375	1861 bp upstream
Rr502014	regulatory region 502014	1929 bp proximal
Tssr134286	transcription start site region 134286	1864 bp downstream
Tssr134287	transcription start site region 134287	1914 bp downstream