rs36364475 SNP Detail

Summary

• ID
  rs36364475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:118282645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACAGCCT CCCAACAAAT
  GCCTATTTCG TCGGCCTATT TCCCACATTC AACATGGAAG GCAGTCCCAC TAAGAAAGGC
  CTGCAGAGCC TGGGTGCCAG CTCCGTTCTC TTCCTCATGC TATAGACCTC CCCTATCACC
  CTTAAGCCTG CCTGCTGGTG ACTCACTGCC CCTTAACTTA TCCCACTGTA AACAGACACT
  Y
  ACTCCCAGCA GTGACAAGAG AACTAGAGAC TGAGGCTCAG TCCACACAGT GGAGGGCCCA
  CACAACACAC AAAGCAGTAT GACCAACTCT AAAGGGCACC TAACTGCTCG GAAGGTCTGC
  TGTGGTGCAT GGGGAGAAAG ATGAAGCCCA CCAGGATGCA GTGACCACCA GCACTGTGAG
  GGTCACCACA CCAACAGCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51188619	NES13833142	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36364475					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51188619	NES13833142	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118282645 () rs orientation: forward

Symbol	Name	Function Class
Fbxw8	F-box and WD-40 domain protein 8	Intron
Rr618824	regulatory region 618824	494 bp distal
Rr618825	regulatory region 618825	1359 bp proximal